Documentation

Here is a list of all modules:

[detail level 12]

Functions with Short Names Available	List of functions and data structures that have short names available
▼Data Structures	How the simulation stores data
Deletor Functions	For deleting and free associated memory of data structures
Mathematical functions	For mathematical and statistical operations as required by the package
Utils/Supporting Functions
Setup Functions	For setup of the simulation (loading founders, genetic maps, and optionally allele effects)
▼Data Access and Search Functions	For non-persistent access to simulation results and contents
Genotype Iterators	For iterating through the genotypes in the simulation
Getting data from an Iterator	These functions take as a parameter a gsc_GenoLocation (the output of iterators), and access the data for the single genotype that the iterator has found
Data Searching Functions	These functions search the simulation data for the genotype that matches a particular known piece of information, eg a name, id, global index, or set of parents
Collective Data Access Functions	These functions return vector data, rather than data on a single genotype or single group
Seletion/Group Modification Functions	For simulation of selection or structure in breeding programs
▼Crossing and Progression Simulation Functions	For simulation of progression steps in breeding programs
Meiosis Simulation Functions	For simulation of meiosis
Breeding Value and Allele Count Calculators	For calculations related to the loaded allele effects and internal additive breeding value model
Saving Functions	For saving persistent simulation results
Recombination Calculators	Experimental functions for retroactively calculating number of recombinations